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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|74213823
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GCQPWGTGGR RRLPRWLQGT WCWRRAPVTA RSDTAVARGP RQEPVTERGA EREAAGSEVC  60
   61 EDEDTCFIMC ASVKSNIRGP ALIPRMKTKH RIYYVTLFSI VLLGLIATGM FQFWPHSIES 120
  121 SSDGGVEKRS IREVPVVRLP TDSPIPERGD LSCRMHTCFD VYRCGFNPKN KIKVYIYPLK 180
  181 KYVDDAGVPV SSAISREYNE LLTAISDSDY YTDDINRACL FVPSIDVLNQ NPLRIKETAQ 240
  241 ALAQLSRWDR GTNHLLFNML PGAPPDYNTA LDVPRDRALL AGGGFSTWTY RQGYDVSIPV 300
  301 FSPLSAEMAL PEKAPGPRRY FLLSSQMAIH PEYREELEAL QAKHQESVLV LDKCTNLSEG 360
  361 VLSVRKRCHQ HQVFDYPQVL QEATFCTVLR GARLGQAVLS DVLQAGCVPV VIADSYILPF 420
  421 SEVLDWKRAS VVVPEEKMSD VYSILQNIPQ RQIEEMQRQA RWFWEAYFQS IKAIALATLQ 480
  481 IINDRIYPYA AISYEEWNDP PAVKWASVSN PLFLPLIPPQ SQGFTAIVLT YDRVESLFRV 540
  541 ITEVSKVPSL SKLLVVWNNQ NKNPPEESLW PKIRVPLKVV RTAENKLSNR FFPYDEIETE 600
  601 AVLAIDDDII MLTSDELQFG YEVWREFPDR LVGYPGRLHL WDHEMNKWKY ESEWTNEVSM 660
  661 VLTGAAFYHK YFNYLYTYKM PGDIKNWVDT HMNCEDIAMN FLVANVTGKA VIKVTPRKKF 720
  721 KCPECTAIDG LSLDQTHMVE RSECINKFAS VFGTMPLKVV EHRADPVLYK DDFPEKLKSF 780
  781 PNIGSL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle