YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|85701977, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDNYCLQAA LVCLLHSDID AGDGNIKYIL SGEGAGTIFV IDDKSGNIHA TKTLDREERA  60
   61 QYTLMAQAVD RDTNKPLGPP SEFIDKDQDI NDNPPEFLRE IYHTNVPERS NVGRNISYQV 120
  121 TASDADNPTY GKSAKLVYSI LEGQPCFSVE AQTGIIRTAL PNMDREAKEE YHVVIQAKDM 180
  181 GGHMGGLSGT TRVTITLTDV NDNSAKFPKS KESKLVFDND HCSARASSFL SLLIYPAFKR 240
  241 KSLEIQESFS

Type	Start	End	Confidence
Signal Peptide	1	21	0.63
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	250	0.99