YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|34538351
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYLTISQIS SLLFFSVLFI SAHAARFEIR NECSYTVWAA ASPGGGRRLD PRQSWTIDVP  60
   61 AGTAMARIWG RTNCNFDASG RGHCQTGDCG GLLQCKGWGV PPNTLAEYAL NQFGNMDFYD 120
  121 ISLVDGFNIP MVFGPTNGGC HNIRCTADIN GQCPNELRAP GGCNNPCTVF KTNEYCCTQG 180
  181 YGTCGPTRYS RFFKDRCRDS YSYPQDDPSS TFTCPAGSNY RVVFCPRGSP HIEMVGSKSQ 240
  241 EK

Type	Start	End	Confidence
Signal Peptide	1	24	0.99
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	242	0.99