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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|87133390
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.72
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLCRCLQLR LLLAAMATAA MAAVTSTQDA TPHPGEPPSW KNSLQKDVSV SLGQRTELRC  60
   61 RVAGDPRPSI TWMHNGIVIQ DEMPRYDLGR FRLTINNVQW EDEGVYTCIA ENIFGTIQGN 120
  121 ITLHVHERES DDNFSGDGFL MDTVGAEGVD VGDLAALRDG DDEDYATDEE DEDDEAGMIH 180
  181 DDAPRPPVWQ KPEDNQKIIA APAGNTVRMR CPATGYPRPT IRWLKDKQKF GESDRMEGYK 240
  241 IRNKHWSLVM TGIVPSDEGF YTCIIQNDYG SINHTYELDV IERSPSRPIL APGLPQNQTV 300
  301 VVGSTVDFQC KVFSDAQPHI QWLKHYEVNG SYVDANGKPH VRVLKTADVN NTKQDLEKLV 360
  361 LRNVTEEDAG QYTCLAGNSI GFSYNSAWLT IIPEYPTPPT VETRKPVKPD KYDIAAEIAV 420
  421 YSVGGVFLLT IFAFVAIYYF RFKRKQVPKT NEPPLCQLKK PLHLKRQVSL ESSSSINSNA 480
  481 PLVRLRSTRL SSSLGGVTEY ELPLDPDWEF PRDRLHLGKP LGEGCFGQVV MADAVGIIEK 540
  541 ETVTTVAVKM LKEDATEREL ADLVSEMETM KRIGKHKNII NLLGCCTQDG PLFVIVEYAE 600
  601 HGNLRDFLRA RRPPSMDYYK MAVECDKPLT HKDLVSFAYQ IGRGMEFLHS KKCIHRDLAA 660
  661 RNVLVAEGNV MKIADFGLAR DIHNMDYYKK TTNGRLPVKW MPPEALFDRV YTTQSDVWAF 720
  721 GVLLWEIMTL GGGPYPGIPV EELFKLLKEG HRMERPQNCS AEMYELMRWC WQANPNTRPN 780
  781 FNILVENLDR MLTLSANEDY LDLEAPLDSF TTSSSQPPSY HGSSDDVFEE DAKVDTVMLP 840
  841 PQAPSRKPTD NKETTI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle