YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|87241323
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKLFWLFIA IGLVIINLVY GQQHHFFNET EELFLLEAHE HAASFLEEGN GNPLLVGLTL  60
   61 VHNAAAKGAV CLDGTLPGYH LHRGYGSGAD SWLVNLEGGG WCNNVRSCVY RKKTRRGSSL 120
  121 YMEKEIPFTG ILSNKPEENP DFFNWNRAKL RYCDGGSFAG DGEDQDAELQ FRGQRIWAAA 180
  181 MEDLISKGMH FANQALLSGC SAGGLATIIH CDEFRGLFPR TTKVKCLSDA GLFLDSIDIS 240
  241 GERTLRNMYN GVVGMQEAQK NLPQICTNHL DPTSCFFPQN LIASVRTPLF LLNTAYDSWQ 300
  301 IQSSLAPPSA DPHGYWHECR LNHAKCTRPQ IKFLQGFRTH MLNSIKDFSR SNKNGLFINS 360
  361 CFAHCQTERQ DTWFSDNSPV IRNKVIALAV GDWYFDREGV KVIDCPYPCD NTCHHLVFS

Type	Start	End	Confidence
Signal Peptide	1	21	0.95
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	419	0.99