YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74198070
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEPEVTYST VRLHKSSGLQ KLVRHEETQG PREVGNRKCS APWQLIVKAL GILCFLLLVT  60
   61 VAVLAVKIFQ YNQHKQEINE TLNHHHNCSN MQRAFNLKEE MLTNKSIDCR PSNETLEYIK 120
  121 REQDRWDSKT KTVLDSSRDT GRGVKYWFCY STKCYYFIMN KMTWSGCKAN CQHYSVPILK 180
  181 IEDEDELKFL QRHVIPENYW IGLSYDKKKK EWAWIDNGPS KLDMKIRKMN FKSRGCVFLS 240
  241 KARIEDIDCN IPYYCICGKK LDKFPD

Type	Start	End	Confidence
Cytoplasmic	1	44	0.94
Transmembrane Helix	45	66	0.92
Non-Cytoplasmic	67	266	0.96