YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74212127
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHGSGLVRT TCSSGGALGP GQPSEGLLDR VYPLTHGALF KVAQMVTLLI AFICVRSSVP  60
   61 IDYGAHSFFE VVTMCDLIMI LIFYLVHIFR FYRVLTCISW PMSELLHYLI GTLLLLIASI 120
  121 VIASKSYNQS GLVAGAIFGF LASFLCLASL WLSYKITCIT QSSDASA

Type	Start	End	Confidence
Cytoplasmic	1	36	0.92
Transmembrane Helix	37	59	0.84
Non-Cytoplasmic	60	66	0.75
Transmembrane Helix	67	89	0.87
Cytoplasmic	90	104	0.84
Transmembrane Helix	105	124	0.95
Non-Cytoplasmic	125	131	0.77
Transmembrane Helix	132	154	0.92
Cytoplasmic	155	167	0.92