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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|74178933
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSPERSCEAS LFPLPWASRG GHPGREPLRN RSPSPTALRT LGPILAFLLR LLHLGLDSGC  60
   61 CGEDVPPPGR GKKEEKMKKN RRALALVSCL SLCSLVWLPS WHVCCKESSS ASTSYYSQDD 120
  121 NCAIGSEDTQ FQKKNEREEP SNAELSGKSN SYLTISPEGN KIKDDYTVDV QDLETTKLSL 180
  181 PVVEALPTVD LHEESSSVVV GSETIENSSS SSTSERTPVS ELDEVEKSGT LSIAKPGEVE 240
  241 QPEADCDAGE APDADAPVEQ PAFVSPPESL VGQHIENVSS SHGKEKVTKS EFESKVSVSE 300
  301 QDGGDPKSAL NTSDTLKNES SDYTKPGETD PTSVTSPKDP EDIPTFDEWK KKVMEVEKEK 360
  361 SLSTGQSLHP SSNGGPHATK KVQKNRNNYA SVECGAKILA ANPEAKSTSA ILIENMDLYM 420
  421 LNPCSTKIWF VIELCEPIQV KQFDIANYEL FSSTPKDFLV SISDRYPTNK WIKLGTFHGR 480
  481 DERNVQSFPL DEQMYAKYVK MFIKYIKVEL LSHFGSEHFC PLSLIRVFGT SMVEEYEEIA 540
  541 DSQYQSERQE LFDEDYDYPL DYNTVEDKSS KNLLGSATNA ILNMVNIAAN ILGA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle