YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74204396
Protein type:	Globular with Signal Peptide
Type Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATAAAVNG STTVSSSGPA ATSGGILQAA AGMYEQLKDE WNRKSPNLSK CGEELGRLKL  60
   61 VLLELNFLPT TGTKLTKQHL ILARDILEIG AQWSILCKDI PSFERYMAQL KCYYFDYKEQ 120
  121 LPESAYMHQL LGLNLLFLLS QNRVAKFHTE LERLPAKDIQ TNVYIKHPVS LEQYLMEGSY 180
  181 NKVFLAKGNI PAESYTFFID ILLDTIRDEI AGCIEKAYEK ILFAEATRIL FFSTPKKMTD 240
  241 YAKKRGWVLG PNNYYSFASQ QQKPEDSTIP STELAKQVIE YARQLEMIV

Type	Start	End	Confidence
Signal Peptide	1	23	0.74
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	289	0.99