YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74215259
Protein type:	Transmembrane
Type Confidence:	0.85
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGALVRKAA DYVRGKDFRD YLMSTHFWGP VANWGLPIAA INDMKKSPEI ISGRMTFALC  60
   61 CYSLTFMRFA YKVQPRNWLL FACHVTNEVA QLIQGGRLIN YEMSKRPSA

Type	Start	End	Confidence
Cytoplasmic	1	20	0.76
Transmembrane Helix	21	41	0.59
Non-Cytoplasmic	42	49	0.68
Transmembrane Helix	50	71	0.75
Cytoplasmic	72	109	0.56