YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115974633, gi...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFQIISRTTA GVVAGVAGTL FIGYCIYFDR KRRSDPLFRQ KLKERRKLRG ETCSKPGSGS  60
   61 SGGGQKLEIP DLKDAEAVQR FFLQQVQRGE ELLASGDFEN GVEHLSNAVA VCGQPQQLLQ 120
  121 VLHQTLPAPV FQLLVQKLPQ TSKKIAALSE ARSSGATIQE IDDLE

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.56
Transmembrane Helix	8	28	0.91
Cytoplasmic	29	165	0.61