YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MNHG2_STAS1
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQITSEIVNL IAAIMIFLGS IIALISSIGL IKFQDVFLRS HAATKSSTLS VLLTLVGVII  60
   61 FFISSQGYLS VRLILALVFI NLTSPVGGHL ISRAAYRTGA YMYRKSDAPR QTNILLSSSE 120
  121 NNTFEQLKQR AHEREERRRK TYEKEHDY

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.85
Transmembrane Helix	8	31	0.90
Cytoplasmic	32	45	0.74
Transmembrane Helix	46	65	0.90
Non-Cytoplasmic	66	72	0.63
Transmembrane Helix	73	92	0.89
Cytoplasmic	93	148	0.88