YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MNHE1_STAS1
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIQILVNLI LSVFWLFVTG SYNFNNFILG YLFALLLVYI MRGVLPGRFY LITVYKIIKL  60
   61 FLVFLIELIK ANIDVIRIVV KPNIDNEPAF FTYNTDLKKD WQIVLLSNLI TLTPGTIVLG 120
  121 ISDDRTKIYI HSIDFSTKEE EVESIKSSLE KVVREVGENE

Type	Start	End	Confidence
Cytoplasmic	1	4	0.72
Transmembrane Helix	5	24	0.66
Non-Cytoplasmic	25	26	0.50
Transmembrane Helix	27	52	0.69
Cytoplasmic	53	160	0.72