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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73663050, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKKKNTYKV PSIVALTLAG TALTTHHAQA ASNTQDQTPN KNVLDDEKAL NQSEQIKSEI  60
   61 SKPTTNISGT QTYQDPTQVK DASSNEDTNY DAQLDELNDQ TSEQTSNQDT YNQETDVQED 120
  121 QQDVSSDNDT KSLDTEQTSV EDNNQENEEN NTDSIQSETN STNEASQTSN DVSSNAEETN 180
  181 TDENSSDVAN QNEPVAQNDK AETSNEDVAS SDVKQDGTHS DANTSDVADK NESETQDDKA 240
  241 ETSNEDVASS YFKQDDTQSD DNASDDVKDQ NESETQNDKA ESSNEDDVAS SDVKQDDTHS 300
  301 DANTSDVADQ NESETQDDKA ETSNEDDVAS SDVNQDDTHS DANASDDVKD QNESETQNDK 360
  361 AETSNEDDVA SSDVKQDDTH SDANASDIAD QNESVAQNDK AETSNEDVAS SDKQDDTHSD 420
  421 ANASDIADQN ESATQDDKAT SKEDDVVSND KQDNAKVSTS SKEASTAENK VQPATFSAKV 480
  481 TPKLRVATTS ANTAVATRSA VTKEATTRAA LPKYSPKVNS SINNYIRKNN FKAPNYEQDI 540
  541 ANYLPQYNYR YGKPEGIVMH DTANDNSTIT GEINYMKNNY TSAFVHAYVD GDRIIETANT 600
  601 DYLAWGAGPQ ANDRFIHVEL VHTHDYDSFA RSINNYADYA ATNLQYYGLV PDSAEYDGVG 660
  661 TVWTHQAVSN YLGGSDHSDP HGYLAAHNYS YDELYDLIYE KYLIKTGQAA AWGTTSSGST 720
  721 GGTGGSTGSG NTGTTPPSKS GTVKVTENNG VGRINSKNDG LYTTVYDQKG KKTDRVNQTL 780
  781 KVTKSATLGK EQYYLVSDYN KGTLIGWVHQ GDVSYNAAKA AAKINKTYKI NPGEVIYTVP 840
  841 WGTSSQKAGS VSGKSAQTFK ATKQQQIGKT NYIYGTVNNL TGWVSLSKLT APSTTPSKPS 900
  901 TTAKLVVSNL TNQQGTVAKS NHGVYTSVYD KQGVQKSYVN GQTYKLSKKA TLGSNAFYLI 960
  961 TDNKTNTNLG WMQTGDITVK ETAKKPAATQ TQTVSKIGQL NATNSGIKTT VYDPKGKDAS1020
 1021 KFSGKTFTVT KQRTQGNNTY VLIQNTNQNT PIGWVNTKDI NTRNLSKTTA KNGQYTVKAT1080
 1081 NNGLYAVPWG TKSQQLDTLK NVKNNQFNAS KSVYVDKDEY IYGIVNNKTG WIAAKDLNST1140
 1141 TKTPSVTKSA VTPIKYDYII HNQKGSYYID PLTGKAAGSL KDFYEGIFTV YEKQVINGVT1200
 1201 WYHGKLANGK VVWVKEDDLR KELVKYYKSG LTLDQAVAIQ KGLKFKPQIQ HTAGKWEDAS1260
 1261 ATEIKNAMDS SKLIKDPTQK YQFLRLDKSQ NISSADLDKL LVGKGILEGQ GEAFSEAAKA1320
 1321 YNINEVYLIS HALLETGNGT SKLANGGDVV NGKVVTNGKD KYYNMFGIGA VDSDAVKQGF1380
 1381 ATAKNNGWNT VKKAIVGGAK FIAGSYINQG QNTLYKMRWN PENPGVHQYA TDVAWAAHNA1440
 1441 TRIKGFYDSM GKLGKYFDVD TYK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle