YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71847114, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDQTTPLQL INRRRLLGAS LLLLGGCASF QSAKPVAPAR PKVGLALGGG AARGFAHIGV  60
   61 IKMLESHGIY PDYVVGTSAG AVVGSLYAAG YDAFAMQKIA QQLDEKIFAD WTLGGRGLLK 120
  121 GEALQEFINQ HLNKRPLEKL NRPFATVATD LNSGERVVFR TGDSGMAVRA SASVPGVFQP 180
  181 TQFRGRSYVD GGLTSPIPVQ AAREMGADIV IAVDISSRPE GQPVDSMTAI IWQTTTIMGG 240
  241 AIGANELRGA DIVIRPKLPY VKSWDFTARN DAMLEGERAA QAALPAIKQK LGR

Type	Start	End	Confidence
Signal Peptide	1	32	0.95
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	293	0.98