YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71906877, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSTRKGIIL AGGAGTRLHP ATLAVSKQLL PIYDKPMIYY PLSSLMLAGI RDILVISTPQ  60
   61 DTPRFHQLLG DGSQWGINLQ YAIQPSPDGL AQAFLIGSDF VGNADSALVL GDNIFYGHDF 120
  121 HHLLANASQR TSGASVFAYH VHDPERYGVA EFNAQGKVLS LEEKPKCPKS NYAVTGLYFY 180
  181 DNQVVELARS LKPSARGELE ITDLNSLYLE QGQLNVEIMG RGYAWLDTGT HDSLLEAGQF 240
  241 IATLEKRQGL KVACPEELAY RQGWINAEQL TALAVPLAKN GYGQYLLAML KDKVIG

Type	Start	End	Confidence
Signal Peptide	1	24	0.89
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	296	0.99