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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71846204, gi|...
Protein type: Transmembrane
Type Confidence: 0.80
Topology Confidence: 0.45
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNMFKNLAI WLVIGLVLMT VFNQFNNRQV ATGSVEYSQF IEEVKAGRIS KVVMEGRTLK  60
   61 ATTSEGKRIT SYAPPDLWLV SDLLKNGVKI EAKPEEEPSF LMNLFVSWFP MLLLIGVWVF 120
  121 FMRQMQGGGK GGAFSFGKSK ARMMDESTNV ITFADVAGCD EAKEEVQEIV DFLRDPSKFQ 180
  181 KLGGRIPKGV LMVGNPGTGK TLLAKAIAGE AKVPFFSISG SDFVEMFVGV GAARVRDMFE 240
  241 NAKKHAPCII FIDEIDAVGR HRGAGLGGGN DEREQTLNQL LVEMDGFEGH TGIIVIAATN 300
  301 RPDILDPALL RPGRFDRQVV VPLPDIRGRE EILKVHMRKV PIAGDVKADV IARGTPGFSG 360
  361 ADLANLVNEA ALFAARRNKR LVDMDDFEMA KDKIMMGAER RSMVMTEDEK MNTAYHESGH 420
  421 AVVAKLVPKS DPVHKVTIIP RGRALGLTMQ LPEQDRYAYD REYLMSRIAV LFGGRIAEEL 480
  481 FMNQMTTGAS NDFERATAMA RDMVTRYGMS DLGVMVYGEN EGEVFLGRSV TQHKNVSEAT 540
  541 MQKVDSEIRR IIDQQYALAR QLLEENRDKV EAMTKALLEW ETIDADQIDD IMASKPPRPP 600
  601 KPSQGSSRAT TPTDTPGAEP SATAPA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle