YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71051325, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHLVEPPPP LHNNNNNCEE GEQSLPPPAG LNSSWVELPM NSSNGNGNGN GKNGGLEHVP  60
   61 SSSSIHNGDM EKILLDAQHE SGQSSSRGSS HCDSPSPQED GQIMFDVEMH TSRDHSSQSE 120
  121 EEVVDGEKEV EALKKSADWV SDWSSRPENI PPKEFLFRHP KRAASLSMRK SGAMKKGGIF 180
  181 SAEFLKVFIP SLFLSHVLAL GLGIYIGKRL STPSASTY

Type	Start	End	Confidence
Cytoplasmic	1	183	0.77
Transmembrane Helix	184	206	0.83
Non-Cytoplasmic	207	218	0.81