YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71282652, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNSYYVKTL FSLLFFSSTL WSKPSHPTDK VVIPTNNWSS QRVLSNVVGQ LIENLGTPVE  60
   61 YINISADRQW GALKRGVIHF QIEVWEPSMG QEFNKLVANG DIIDLGTHEA KVVEDWWYPK 120
  121 YVEDLCPELP QWQALNKCRA LFKGSKTTEK GIYFGGPWNY GDADIIRALG LKFAIERLPD 180
  181 ESALWEALTL AIEKKRPILL LNWSPNWTDN YIEGEFVNFP LYTEQCENIP EWGLNKKLVK 240
  241 DCGNRRGGWL KKAAAPNLKQ KFPCVYHLIQ NISFTNRMIT DASSLAVITR LSDQDAANEW 300
  301 SKKYAKDIKK WSSLECQQ

Type	Start	End	Confidence
Signal Peptide	1	22	0.92
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	318	0.99