YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71282499, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITTKTASAE AQAAATAAAE AARQRLTLTT PEMRAAAQER VERSNIKISD GSEGMLTQSD  60
   61 FFALLTKELA NQDPTKPVDN NQMISQMTAF STTDGVRTLN DSFGSFAGSM TSSQALQASS 120
  121 LVGRSVLVED NVFGMAEGEA VKGKLVSDKP ASNVKIYVEN VAGEVIQTVP VGDVKAGGFT 180
  181 FTWDGQTAKG EPAEAGAYRF RIVGLVEGEA AELEAQTYRK VDSVTLAGSG GKIVLNLNGG 240
  241 SAMALEDVVE VSEGDI

Type	Start	End	Confidence
Signal Peptide	1	21	0.84
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	256	0.99