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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71282497, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKRFNYSTL ALSVCLSLGS TVTFAAEKDT SAGAEHADIE RIVSVGTRIS NRTVADSPSP  60
   61 IDIISSEAIK NSGATSTPDM LRKLAPSFNM NNTTTSDGQD LMRPATLRSL GPDQVLVLIN 120
  121 GKRRHQQAVV AVQENVGRGS AGTDLSSIPM TAISHIEILR DGAAAQYGSD AIAGVINIVL 180
  181 KDDLGGSVWA QYGQTSEGDG ESTEFGGNYG FGVGDKGTLN LTFEYADNGE MNRATPTTWF 240
  241 DAIDEPRQLL LVGEAATEMT SLWANFSYEL GESSELYAFG GFTTKEGESL GFYRPADDNR 300
  301 VWSSLYPEGV TPKLGSKSED YSVAVGFKTQ VADWDIDASV VTGENRFEFS NLESLNASYG 360
  361 PDSPTSAYDG ALIYSQTTFN LDAVTAVDLG FFDETSLAFG AEFRIDGFAQ EAGDMVTYAR 420
  421 GDTLCAESVN PTGDPLMTGC MGGDITTPGM QGFQGYSPAM AIDTDRNSFA LYFDTETAVT 480
  481 EDWLVAAAVR YEDYDDFGST VIGKLSTHLS LTENLAIRAS ASTGYRAPGM QQANFTQRSI 540
  541 SLDNGELADL VTLRPNEELA EELGFTDLKE ENSTNFSVGV IYTNGNYSST LDVYQIDIDD 600
  601 RIVYSGNISR GINDEIDAFF DRHSGPGDSL DGVKNASIFT NAIDSETFGL DWVNQYTQEL 660
  661 SSMDVVYELS YHHNNTEVSA INTSSSIVPN EVVFDNAQRL LVEKAQPQDR ASLSAMFDMD 720
  721 TWSVTGRMTY YGEVTSASYG TPENTWGAKS LFDVTAQWEV TDNINISGGV LNLTDEYPDE 780
  781 WGTNGSPFTD LGFKYGWTSF PFSLAGREYY VRASYNF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle