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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71148220, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVSLYQSGM SGLLAAQQQL ATTGHNISNV NTDGYNRQRA EQNATVGLNN GNNYIGGGTY  60
   61 IQDITRLYDQ FSHKEQITNQ SKLGNADSLH ARLTQLDQVM STSGNAVVGS LDQFYQALNG 120
  121 VADNPNDSGL RSIVLNQANT LSNDFNQLTN NLDQMTKSIN GEIEQVASKI SEISQELAKI 180
  181 NETIMHSQQG GQPNDLLDKR DQLIGELSNY TQVNTVKDAN NVMTVMIGQG TTLVAGITPM 240
  241 TLQVNAGDPD SQQTELRLVS GSSSVALKGS TLGGSLAASF EFRDEHLSQT RTEIDRLAMA 300
  301 ISSTLNDSQA SGLDLNGLQG VNIFTDINST QLQQGRVLAH SGNSGSTQAE ITITDVSKLT 360
  361 TDEFEIRFEG GNFTLYNLTS GSSENLGPPI LPSGGTHKPS SPDYGFSFVE TGTPAAGDKF 420
  421 TIIPTKNSAA LMQTTLTDGN AIAASTAIGV TPSTNNVSDG KIEIINVMNP EDAKSFTGTG 480
  481 LTVDVVESAP GSGIFDYRVF DTATPPALIT SGNYNAGDSE VVDLPPLPGT PAFQIEISGN 540
  541 LVGSGTNARE EFSINDAFGV GNGKHAVAMA KTQEVGVTNG GKETFSKSLA VSTSVVGAKA 600
  601 SNAELTADTA QALFTQAYNR NQSTSGVNLD EEAANLLKFQ QAYQAASQII STANTIFDTI 660
  661 LAAVR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle