YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71282382, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVWIDYAILA VIGVSTLVSL IRGFVKEAVS LVIWISAFFI ASTFYANLAN LLTNISDPFL  60
   61 RNAAAVAILF ISTLVLGALV NYLIGQLVSK TGLSGTDRVL GLVFGALRGV LIISAVIFFV 120
  121 DAFTGAENTQ WWKSSELIPE FKLVVEWFFE YLKGSSSYIT

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.75
Transmembrane Helix	6	25	0.87
Cytoplasmic	26	30	0.75
Transmembrane Helix	31	52	0.89
Non-Cytoplasmic	53	62	0.74
Transmembrane Helix	63	85	0.92
Cytoplasmic	86	99	0.80
Transmembrane Helix	100	123	0.87
Non-Cytoplasmic	124	160	0.84