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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71282373, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNWSLLRLLL ALSSMVSALV FANNTSITNL VYSEKGLAGK QIMTKVSDTQ YHGSLDLRWN  60
   61 NRVFKVDEKI KLNEKGQVLS FESTGLSPFG AAIAESFKWQ DGIASWESNK EDGRVKSTGE 120
  121 RFYLPVNSAV VAENLMVQAM LKNIGNSIEL LPSGTARLTE LKTVKLSAES GSEQVTLYAI 180
  181 SGLGFTPDFS WYDSQGNFFA KDHSGFMKVI REGFTLDDFD KLKVIQNSAE QEYLEGVSSK 240
  241 LSHSYTTLLI KNAQVVDVIN SVVLKNTDVL FKNGKVSHVA KNINVPENTP TIDGSGKTLI 300
  301 PGLWDMHGHL SKGDGLLNIA AGVTNVRDVG NSHDNIMTIE RLFNTNQVIG NRVFRAGFFD 360
  361 QMSEFSAGLS VKSLAEAHEK IDWFADNGYI QIKLYSSIDP TWVESIAKHA HSRGLRLSGH 420
  421 IPAFMTAEQA VKAGYDEIQH INMLFLNFLA GTEVDTRQQL RFTLIGEKAG DVDINSKEFN 480
  481 DFIQLLADNQ TVIDPTISTF RSLLLKERKK IDPEFLAVAE HLPPNVLRQL KGAEMNVSDD 540
  541 LKDNYQAGAD AMSALVKKLY DKGVPIVPGT DNIAGFTLQR ELELYADAGI PEMDVLKIAS 600
  601 INSARLVGAA HYLGSITEGK SADVLLIDGD PLTDMSVLRK TSLVIKDNHF YKPEELYKIL 660
  661 GVKPFTPSSH LQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle