YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71282157, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLLAFAASS SSKSINKQLA TYAASLVPNA TVEILDINEY EMPLFSQDKE ELLGQPEAAK  60
   61 SFFAKLGQAD AIIISFAEHN GSYTAAYKNL FDWTSRIDQK LFQNKPMVLL ATSPGSGGAQ 120
  121 TVLTAATGSA PYFAGDVKAS VSIPSFFDNF DSEKQTISNP VILDELKSAL AQLS

Type	Start	End	Confidence
Signal Peptide	1	14	0.54
N-region	1	5
H-region	6	11
C-region	12	14
Cleavage Site	14	15
Non-Cytoplasmic	15	174	0.95