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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71147892, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLAAYFNQF DKSQLRHLTG LGTPLLVMAA LGMIILPMPA WLLDILFSFN IALSLVVLLI  60
   61 TVYTLKPLDF GSFPAVLLVA TILRLALNVA STRVVLLEGH EGPGAAGKVI EAFGSVVIGG 120
  121 NYAVGLVVFL ILIIINFVVV TKGAGRIAEV TARFTLDAMP GKQMAIDADL NAGFITQEQA 180
  181 KERRTEVTSE ADFYGSMDGA SKFVKGDAIA GILILFINIV GGLIIGMVQH DLSFSRAVEI 240
  241 YTLLTIGDGL VAQIPGLLLS IGTAIVVTRQ NTSQDMGEQV SSQLGQEKSL YVAAGVMFVM 300
  301 GVIPGMPHFV FLLFAAIIAA AAFFGARNKV NLKVELEKQA QDEIVQHQQK EDEVKELDWD 360
  361 DVNHVDVIGL EIGYRLIPLV DKAQGGELLS RIKGVRKKLS QEFGFLVPAV HIRDNLDLDP 420
  421 NSYQISLMGV VVGTAQIRHD QELAINPGQV FGQLDGVATK DPAFGLDATW INQNQREQAQ 480
  481 TLGYTVVDSA TVLATHLSQI LTNNAAQLLG HEEVQNLLDL LAKNYPKLVE GFVPDTLSLG 540
  541 TVVKVLQSLM NEGVAVRDMR SIVQTLVEYG PKSQDAEVLT AAVRISLRKF IVQDLVGGAQ 600
  601 EVPVITLAPE LEQMLHQSMQ MAGDDGAGIE PGLAERLQQS LTEGSNQQEM AGDTPILLTS 660
  661 GILRHVLAKF VKYTIPSLRV ISYQEIPDDK QIKIVSAIGQ 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle