YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71282124, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKYVLRIFF AFILSVHLSS TAQQTTQKTQ KFKPNIQHGV SYQKVDDISQ YYVSEKLDGI  60
   61 RGYWDGKQLF TRRGNLINSP SWFTQHWPTY PMDGELWLAR GQFQLLLSCA TKRIAVENKT 120
  121 TSCWRSVRFM IFDLPKHLGD FNERVIKMRT LLVQNQSVYL AMIDQVKLEE LSALDHKLDE 180
  181 VIATHGEGLM LHLASAHYQQ GRNPALMKLK KYQDAEATVI GYTEGKGKYQ NQLGAIKVKT 240
  241 SDGIIFKIGS GLSDIQRANP PKIGTIITFK YNGLTQAGIP RFARFWRIKA SG

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	292	0.99