YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71282115, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKLLAALLT LSLSLGVSAE TWKFASEEDK QDVQDIFAKT FAKTIKKESD GDIRVKVYYY  60
   61 GQLGTENDIV ELTAKGTIQF VSVGTGHLGS YVPEVQALSI PYVLGTDTDV VRKVLTTSKT 120
  121 IYGDLANRFE KVNLKLLTMM SEGEMVWGAN KAIRSPEDFA GHKIRTFTST IPVETYKAFG 180
  181 ATPTPLSWGE VYGALQLKTV DGMVNPIYFV YNAKWHEVQD YLMFPGQQPY VSTVSTNSTW 240
  241 FNGLSPEKKT MVRKAIVVAE QAAHEYQIRI NQENLDKIIA ERPDLKIIVL NEEERTRFKK 300
  301 LSKSINKTFY DVVENTYQES EKAQARVSAK KIVKNLIKEV KEATKQ

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	346	0.99