YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71147837, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKPFLSTML TLLCFIGLNQ GYTQSSTQDI ALSFFEPLPH VMQGAEQDTS ALINLGKKLY  60
   61 FETALSINHS QSCNSCHNLN NDAAGVDHLK VSIGALGSIG ERNAPTTWNA GLHVAQFWDG 120
  121 RAKTLAQQAK FPIFNVKEMA LTSESQVIER LNSKGYLADF NSGFPQQLSP INLENIAQAL 180
  181 AAFQRTLISK DRFDDYLAGD KDAISQSEKA GLRVFIDKGC VACHNGAVIG GQLFMKMGIV 240
  241 HPYPNKIDKG KAQVTGNPAD NYFFKVPSLR NILNTAPYFH DGAAATIEQA IEDTGWHQLG 300
  301 IKLNEQEVKS IKIFFKTLNN QKRI

Type	Start	End	Confidence
Signal Peptide	1	23	0.98
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	324	0.99