YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71147675, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRKRGELYR NAEQGKIAGV CAGIADYFGW ETWLVRILVV SGVLFGMPFL ILGYVAAWFI  60
   61 LDKAPEKATN ANHEPGESQY AKRHQQGKKN VDVSNESIKV KARIWQAGEP PKQALYDIRR 120
  121 KFRLLEGKVQ AMEQYVTSAE YTVSREINKL

Type	Start	End	Confidence
Cytoplasmic	1	11	0.67
Transmembrane Helix	12	30	0.54
Non-Cytoplasmic	31	36	0.66
Transmembrane Helix	37	61	0.87
Cytoplasmic	62	150	0.89