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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71281873, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIASEAEGAG IGEQKSGFAA SLGSVDILRQ VTIVVALAIC LAIAVFVIML ANEPEYRVIS  60
   61 KLPTKQLITT MDFLDANQVE YQQENNTISV PADEYQNVKL LLAREGLTDE PSQGEDILMK 120
  121 DMGFGVSQRL ERERLKFGRE QQIAKTIEQL KSISRAKVLL AIPRENIFAR REKNPSATVV 180
  181 LTMQRGKILS EEEVDAVVDI VASAVQGLTP NRVTVTDQNG RLLNSGSQDS ISSRSRKEFE 240
  241 IEQKREQEYM EKIDSILIPV VGLGNYTAQV DITMDFTNVE ETQRRYNSDL PALRSEMSVE 300
  301 STNIGGALGG IPGALTNQPP IASAIPEDAT GGQKRSMPSR KHSESTKNYE LDEAISHTKQ 360
  361 QAGVVRRVSV SVALDYVAGV ATTPVEGGAN TPAATFAPRS AGETASIRRL LQGSIGFDLQ 420
  421 RGDVLEVVTI PFNRPDYGVV AEIPIWQQPW FIKVLKLVLG ALVIIVLILA VVRPMLKRLI 480
  481 YPEQTPDDYG DKSLDGHIDL GDETMDMLTS DFDAGAVGFA ADGSLQLPDL HRDEDVLKAV 540
  541 RALVANEPEL SSQVVKSWLN EDE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle