YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71281791, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKIISHNRI SLISQEQTAV RVLKQKGFTL IELVIVVVIL GFLAATAIPK FVDLTEQAKQ  60
   61 ANIEGMAGGF ATGVSLARSQ WEVEARPKDT SGVNMVNYDG TVVYLTSEDR DTSPTISPGY 120
  121 IVGTNSGAGI NSKTMAIADC ISVWDSLLQQ PPLIASNVTE INDDDESYRY LANVTGSGAT 180
  181 TLCHYHLKET LARNSDGNYI APSPLTAVGN SFSYQPANSS VIIYINDKS

Type	Start	End	Confidence
Cytoplasmic	1	27	0.90
Transmembrane Helix	28	48	0.90
Non-Cytoplasmic	49	229	0.85