YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71147472, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIHNLITPGL TAFILIAGAT ATSNAVANEN KIQANDFVEI FVKLGGKHPG YRKAHAKGLC  60
   61 ASGTFLPAPN KHFQGSALLS NGELPVSMRF SLGGSNPTSD EKAPGTRGMG MQIELPNGSL 120
  121 HTFTGNNFPV FAGKDPETFH GFLSTLLPDE NGKSDSAKTI AFIQKHPSVQ ANAMWNQTAK 180
  181 TPASYANTEF FGIHTFYFEQ SNGHKTKFRW NIKPSLGVKT MEKAEAANKP TEFLADTFAQ 240
  241 QLKNETVRFT IMASLGEAED SDIDPSQQWP SERPQVALGT VTVKTSGGDA CKNTNFDPNI 300
  301 MSAGFMPSAD PVLKIRSQAY AISFGKRLSG Q

Type	Start	End	Confidence
Signal Peptide	1	25	0.96
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	331	0.99