YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71147457, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLISLLFIL LFISSASYAE QNKETDKKLT KEKSKPTIIA LAPHIVEMLY DVGAGEQIIG  60
   61 TTSFADYPEA AKKIPRIGNY VRLQLERVIE LQPDLIIAWK SGNPSDDLAR LEQLGFNIIY 120
  121 SQPHTFEDIA NEVRSFAKIT GHTTRGEEVA TKFEQALIKI KQQYQHKTEI TGFYELWSRP 180
  181 LTTVAKGSWP QQFLNICKVK NPFEHVITPY PQISIEQVLP ASVELIIQPL SVNQKEREAF 240
  241 NWQDWSIIPA VANKQILQPD ADAMHRMTLR SLTALKDLCA EIDQTRSFLQ QKHS

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	294	0.99