YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71147429, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKALSFTMC ILASTYASTA LAEERNGWYI GALYNSQTIS IYQSREFKSA GAIAGYKIND  60
   61 IFSIETRLHK GTSGYSFNLL EPGFEDKKYK QDLDYQGHIL AKASYSITEA FNVYALAGYT 120
  121 KTKTEITTLE FHTDLSGNTS VTYPHQYSEN TDGFSYGVGL NYQIYNQFSV FVDYQVLPDF 180
  181 DKYQKSGSWD SLNLGVNYSF

Type	Start	End	Confidence
Signal Peptide	1	22	0.97
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	200	0.99