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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71281602, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQFNSIKVA LCLALALSSV TSFAKEQRPN ILLIVAEDMS AKVGAFGDTV AKTPVLDELA  60
   61 KSSVRYPNTF TTAGVCAPSR TSLITGVHQI TVGGQHMRTR SFKASNYRAV PAPDVKAFPE 120
  121 LLRKSGYYTY VSSKLDYQFS NTSPHTGPFT IWNYEGKKPT WRGREKDQPF FGMYHLDITH 180
  181 ESQLFPKKST KNKKSGLVKN WITPERVVIP AYYPDTQLIR EGIALHYNNI HAMDTQVGKL 240
  241 LAELKKDGLS DNTIVIWTTD HGDSLPRGKR EVYDSGLKVP MIIHWPDKYR PSKTVNGSID 300
  301 SQLLSFVDIA PSILAMANIN TPAYIQGKAR IPNNNATNKI AKREYIYASK DRLDEFPFRE 360
  361 RAVRNNKFKY IKNYLPNKPG ATHLAYRDQM ILMQDLWREF EAGRMNKQQA FWFNNRPGEE 420
  421 LYDIINDPEE VNNLAEKVEY QQQLNIMRNA LKEWQSHVDD LSDRPEIELA NEFWPNGQQP 480
  481 ITAKPSIYLD ESGLIAIKGN TQGSSIGYQT SNLNKKGKWI TSKIRVYNQP FAVEKGMKII 540
  541 AKAVRYGYKT SEKTIRIF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle