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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71281572, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESEERRKFF GKSALIGAGV VAAPMTAAMF ASTAQAQRKE LAMSPVVHPG ELDEYYGFWS  60
   61 GGHSGEVRIM GIPSMRELMR IPVFNTDSAT GWGLTEESKR VKGDSADIMM GDSHHPHMSM 120
  121 TDGSYNGKYV FINDKANSRV ARIRCDIMKC DKMLTVPNVQ AVHGLRVQKA PYTKYVVCNG 180
  181 EFEIPMNNDG KDGMRDVSTY RSLYNVIDAE TMEMAFQVMV DGNLDNTDAD FDGKYFASTC 240
  241 YNSEMGMNLG EMISAERDHV VIFSLAACEA ALKAGKFKTY NGNDVPVLDG RKGSELTRYI 300
  301 PVPKSPHGLN TSPEGKYFMA NGKLSPTVTV ISIAKLDDLF ANKIKPRDTV VAEPELGLGP 360
  361 LHTAFDGRGN AYTTLFLDSQ IAKWNVEDAI KAYKGEKVNY IRQKLDVHYQ PGHNHTTQGE 420
  421 SRDADGKWLV VLCKFSKDRF LPTGPLKPEN DQLIDISGDV MKLVHDGPTF AEPHDCIMVH 480
  481 RSKVKPKKVY TRDEPTFAET LAIAKRDGVD PMSDNKVIRD GKKVRVYMTS VAPTYGMSEF 540
  541 TVKLGDEVTV IITNLDQVED VTHGFCMTNH GVQMEIGPQQ TSSITFTANK PGVQWYYCNW 600
  601 FCHALHMEMR GRMFVEA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle