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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71281559, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSKIIYTYT DEAPLLATCS LLPIIKTFAA SADIDIELKD ISLASRVLSA FSDILPADQQ  60
   61 VPDTLAELGA LTHHPDTNII KLPNISASIP QLKDVISELQ AQGYAIPDYP ESPKTDEDRS 120
  121 NEAKYSKTLG SAVNPVLREG NSDRRAPPSV KAFARKNPHS MGKWSQASRT HVSHMHSGDF 180
  181 YASEKCMTMD KACDVKIEFV AKDDGAVTVL KEKTSLQAGE IIDSMFMSKK ILCEFLEQEM 240
  241 EDARETGVMF SFHVKATMMK VSHPIVFGHA VKVYYKDLFA KHAETFEKLG VNANDGVSSI 300
  301 YEKVKQLPES WREEILADLH ACYEKRPELA MVDSAKGISN LHTPNEVIVD ASMPAMIRAG 360
  361 GKMWGPDGKL KDTKAVMPES TFARIYQEII NFCKTHGAFD PTTMGTVPNV GLMAQKAEEY 420
  421 GSHDKTFEVQ GDGCIRIVDD EGKTLLTMDV EEGDIWRMCQ VKDAPIQDWV KLAVARAKLS 480
  481 DTPAVFWLDE YRPHEAELIK KVKLYLKDHD LTGLDIQIMS QTRAMRYTLE RILRGGDTIS 540
  541 VTGNILRDYL TDLFPILELG TSAKMLSIVP LMAGGGLFET GAGGSAPKHV KQLIEENHLR 600
  601 WDSLGEFLAI SASLEDLGIK QDSAKAKLLA KTLDQATAEL LENGKSPSRK TGELDNRGSH 660
  661 FYLALYWAKA LAEQTEDTEL QHHFAPLAQS LTENEAAIVS DLTTDQWHSV DIGGYYKADA 720
  721 KKIIEIMRPS KCFNEVLAAF K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle