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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71147274, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVYQGQSERK NYIVATVAVI GLILTIELTQ MIGMSNAYQQ MHQQSSQQLS NLVGYIDNIL  60
   61 GRFDRIPKVL SKHPLLSQAL ISPNEQSKIT KLNQLLADIR TMTQASDIYL IDKKGITIGA 120
  121 SNWQLPNSFV GMNFMFRPYF QDALKGKLSH YYAVGLSSGK RGFYYAYPVV VDGVIAGVIA 180
  181 LKISIADIEE QYKKTVLNDS FNFLIVAPHD VVFISDRPEW RLKTIGNLSK AKQLNLIAEK 240
  241 RYTDKEISSL NVEDISNHYL PNDLGSELLE VTSNTGSEEV FALNKLMKTA NWQVHLWSSV 300
  301 APMKKQQNLL IILSASGYLL MVFLLLFTNE RLKNARRLKQ SQQLLEKKVK ERTSDLSASN 360
  361 VKLHEEIAQR QQAQTQMNKM RDELIQSEKL ALIGSMSASI NHEINQPLTA LRSYSENALA 420
  421 YQERSMTDKV KNNLSLIIGL VDRLSDIVSQ FNSFSKKSTG VATAVDVQMS LMAAMSIVKH 480
  481 QAKAARVEFT SKPCLETVHV YGDAIRFEQV LVNLLSNAIQ ALSEQEHKQI IISVSDVKEH 540
  541 VIIEIRDNGP GILVDNIDRV FEAFFTTKEN FGLGLGLSIS HRIIESMQGQ LNVSNHPDGG 600
  601 AIFTISLPVN R

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle