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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71147185, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTPSFFHSI SSLNRAVYIA LSASLLVSAC GETSKSTQSS QLDNQGVDIA AKSKTITASA  60
   61 FKVSDLDNLP SDSSAHWLST NILVLPKSVN KFQYQLLSKN SVGFSSIDLM PVNFPEKLAT 120
  121 KFPHLADFQA FELQLTPDQS KRWLKQQVMV VAIDATIDTT VEPALKTSKQ AKEVAYVQIG 180
  181 GVIDALYTQG KNDADEVTDL GATIISNQEV EGVSTAVSFK LWAPTAQAVS IQLFDDNLQA 240
  241 LSDGKLEMVE DSSTGVWQVL SDSQASYAYY KYQVNVYHPA SKKIESLSVT DPYSLSLSVN 300
  301 SEYSQVVDLN DAVTQPKDWL TQQIPTVKNV EDNVFYETHI RDFSANEQQL SDSGFKGKYK 360
  361 AFSEKNSDGI QHLKALQIAG LNNIHLLPTF DIATVNEDDS KHLDIDDSLG KVCAITKNIS 420
  421 LCQQPYDEKQ SIKSLLQSYE VAGEQTQQLV SELREVDNYN WGYDPFHYTV PEGSYAVDAK 480
  481 GVSRLVEFRE MVQSLHAMGF RVIMDVVYNH THQAGLEPNS VLDKIVPTYY HRLDPLTGDI 540
  541 EQSTCCDNTA TERVMMAKLM TDSLVVWARD YKIDGFRFDL MGHQPKDAML TAREAVRLVD 600
  601 NDTYFYGEGW NFGEVASNSQ FIQASQLELG GSEIGTFSDR LRDAVRGGGN NTRDSQGVGN 660
  661 GLLTFPNNKQ PNESQDQTMI QADYALRMDQ LRIGLAGNLI NFPLRTLKGE SNGEKVLGKD 720
  721 IPYGDQPTGY ALDPADTINY VSKHDNQTLW DNSQYRLPFD VSTEDRVRMH LQSLSFALFA 780
  781 QGIPFIHMGS EFMRSKSFLR DSYDYGDWFN RVDFSKQDNF YNVGLPPAEK DKDNWPLIKE 840
  841 VLAGHQGRDQ VNAEQIQRSS NAFIDMLAIR MSSPLFRLTT EQSIIDKVSF LNAGALKQGG 900
  901 SISAQQTGLL VMKIDDTQGE AVDSKYQSLL VIFNISDKTQ TFNYNFKEDF DSTSTHGYQL 960
  961 HPIQKRGSDE VVKQSKVTVK GFIVPPLSSV VFVKPDSK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle