YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71281425, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKASCNKYFL NKNRLDRRLK NSGFTLLELI IVIIILGIMS VGIAGFITLS TQTYLNVTER  60
   61 DKLLSSARFA VERLNREVRN AVPNSLRTFN NNSAQCLEFT PIKASTMYID IPVVPDDKSG 120
  121 EIEVVSFVDS SGNPFACTGF CLDYVAVYPL QSSDIYDFNV NSGKGKVTAF KAFSNLPGSI 180
  181 WTVPIRPNAG MIFDEHSPTK RAYVFDAPVS YCVNNSELRR YFGHSFTANQ SLTPTGGFVL 240
  241 MAESLTFDQN DLPFKVLPAT LQRNAMVQIK LNFDRDGEVV SFNNDIHINN VP

Type	Start	End	Confidence
Cytoplasmic	1	23	0.94
Transmembrane Helix	24	47	0.93
Non-Cytoplasmic	48	292	0.99