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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71281414, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTINKNTNDS VERPVVKVRH ITLTGIILGL VFGVIITLVV TSFLPSTTSV SDSSKEENKP  60
   61 LYWVAPMDAN FRRDQPGQSP MGMDLIPYYG SQNNTIDEGA GTIKISPSVI NNLGVRTTTA 120
  121 TYRPLKTTIE TVGYVTYDED KLVHIHPRIS GWVEKLYINA IGDPVTKGQP LYDIYSPELV 180
  181 NAQEELLLAL DRKNKRLISA AENRLIALQI PRKAINALKK DKKVQLNVTF YAPQNGVVES 240
  241 LFVRQGFYVK PETMMLSIVD LNQVWVKAEV FERDVFKVVI GDSASMRLDY LPSKQWLGKV 300
  301 EHVHPMLNPK TRTGIVRLHF NNQNGDLRPN MFAQISIAIN DNEPALQVPK EAVIRTGNQD 360
  361 RVVLALGDGY FKSVAVKIGR FDRDNIEIIS GLSEGEKVVS SAQFLLDSES SKTSDFKRMH 420
  421 IEEFQSDDFM DESNNDVSSA MVNGTVTSVM TDHRMVTIDR EAIEKWNREP ASVDFIVSES 480
  481 VDMALFTVDA YLMFTFEIRE GEFIIVSAMA MKKGMSGSSS HDMAQGEKQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle