YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71147119, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.68
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSSMNVKAN QKGFTLIELV VVIVILGILA VTAAPRFIDV QDDARTATLD AIKGSIESVK  60
   61 ALVHSKSLIA GNETVGAAAA SGGAAAVTPV VVVNGVDVNV SFGYPRSNTA SVTEWEVNLL 120
  121 DIAVGAASPN DDGEFVVSSI SDVIYITPDP DGTNTKLTVV PTTCFVIYTE AASAANADIP 180
  181 VTAVTDC

Type	Start	End	Confidence
Cytoplasmic	1	13	0.61
Transmembrane Helix	14	34	0.64
Non-Cytoplasmic	35	187	0.78