YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71147100, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRVVITGLG IVSSIGNNAD EVLASLKAGK SGISHSESFA EQGLRSQVWG KPDIETKDHI  60
   61 DRKAIRFMGD AAGYAYIAMD QAVKDAKLTE DQVSNFRTGI VAGSGGASSE NIVASTDTLR 120
  121 NRGIRRVGPY AVPKTMGSTV SACLATPFKI KGVNYSISSA CATSAHCIGN AMELIQLGKQ 180
  181 DIVFAGGGEE VHWSLAMMFD GMGALSAGRN DTPELASRTY DADRDGFVIS GGGGMVVVEE 240
  241 LEHALARGAH IYAELVGYGA TSDGYDMVAP SGEGAVRCMQ QAMQGVEGKL DYLNTHGTST 300
  301 PVGDVKELGA IQELFGEDSP AISATKAMTG HALGAAGVHE AIYSILMMEN NFVAPSINID 360
  361 NLDEKAQGLD IVTEKRDVEL NLVMSNSFGF GGTNATLVMK KYK

Type	Start	End	Confidence
Signal Peptide	1	19	0.75
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	403	0.99