YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71281332, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTNILKALL PTSTAGSLPK PAWLAEPETL WSPWKLQGEE LTEGKHDALR LSLQDQQQAG  60
   61 IDIVSDGEQT RQHFVTTFIE HLNGVDFEKR KTVKIRDRYD ASVPTVVGPV SRQKSVFVED 120
  121 AKFLRQQTKQ PIKWALPGPM TMIDTLYDDH YKSREKLAWE FAKILNQEAK ELEAAGVDII 180
  181 QFDEPAFNVF FDEVNDWGIA CLERAIEGLN CETAVHICYG YGIKANTDWK KTLGSEWRQY 240
  241 EEAFPKLQKS NIDIISLECH NSHVPMELLE LIRGKKVMVG AIDVASNTIE TPEEVANTLR 300
  301 KALKFVDADK LYPCTNCGMA PLSHQVARGK LNALSAGAEI VRRELST

Type	Start	End	Confidence
Signal Peptide	1	24	0.90
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	347	0.99