YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71147041, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKWFIGLMV CFFLSSYVVA QPEVRVGVLK FGTVNWEIDV IKHHQLDKKF QFDLTVMALA  60
   61 SKNASAVALQ SKAVDIILSD WLWVNRQRFE QRMYTMYPTS MATGGLYVSA NSAVKSLADL 120
  121 KGKKVGIAGG AVDKSWLLLQ AYSQKKYGLD LKKQAEPTFA VPPLLNRLML RGDLDAAINF 180
  181 WHYGARLKAA GYETLVTVPQ MLAELGIETK IPLLGWVFDQ TWANEHPEAI TRFLQASLEA 240
  241 KQILLSSDKE WQRIRPLIKA ENEDVFTLLK KDYRAGLLRE FGDKEIAASQ QVFEILAEQG 300
  301 GSTLVGKATA LSEGTFWRNN TLDKTSRAKS IQ

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	332	0.99