YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71281246, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADEKDNGKE GELELDKSGK KKKIIIIIIA VVVLLGGGAG AYFFFMGGVD NSASQAELDT  60
   61 ALDSDSGEVT KVESGAQLGS ALYVPMPRPF RFNVPGAARD RFVEIRVQLL VRGGDNEENA 120
  121 KMHIPLIEST LLDIFSQANA DDLATSAGKV SLKQKSLAAV QKIMTDIEGD KTVEKVLFTG 180
  181 FVMQ

Type	Start	End	Confidence
Cytoplasmic	1	23	0.99
Transmembrane Helix	24	46	0.94
Non-Cytoplasmic	47	184	0.97