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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71146946, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTSKVSVAV CLALSSQLAI AEVTDEDKYL LDSITVIASD TDIQESVRSP QAITAVDAKT  60
   61 ISNISSKNVP AAIQILPNVD VLGGPTPSNE NVSIRGLPQS HAYVAIDGIY QSNFATKRGS 120
  121 WYLNPNFIKN IKVTAGPTSG AAAGKITIET LSALDLLAEG DTFGTKIDLG YRSNNAQQDY 180
  181 GLSLFGKSDT LDYLVSGQTS QRDAYEIGGV GGTYDKTRGD QQSGLIKIGN QFNADQRLTF 240
  241 TVNYDDSRTF QVRNDVGYRD TKYAGSSLVW TDQASDNELL DLQASVYFNN VDSFSWEEER 300
  301 GDVEGTQDIQ DKSFGYSIGN NSLVDFGLLH YGTSGHFTTH TGAILKTDTQ TGEIIEDESA 360
  361 GSEASSNSIK LATWINMQLP VGDSFEIIPG VRYDSFYIES SNAIGLEGEA LLRDGRTESR 420
  421 VSKSLNMLYH FNDEIKFFAS YAEALNAPGN GSLFTSGRGF KPNPELKSER ADNKELGVVF 480
  481 DYQSIFSEGD SWVSRVNIFQ NDIKDFITDL YSTEWPDGER VNIGQAQLKG FEFSTNYHLG 540
  541 DWDLSASYGQ TRGIDKNTGW YLTDMPSDKI NLISNYNVND ELVLGTSATF AFTHDKTPTQ 600
  601 QLVAGGEIED IPSEGVGSWF TMDIFSTYEP KKIKGFKVNL SITNLFDRGY AQRMDFERNG 660
  661 DPKNPIEFYE EGRSINVKMS YAF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle