YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71281158, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSRNPIIAV TGSSGAGTST TTASFEHIFR TLGISSVNVE GDSFHRFSRQ EMDMEKRKAK  60
   61 EARKNISYFG DLANDFSALE KQFRDYSETG RGQIRRYLHT FDEAVPYNQM PGTFTPWEEF 120
  121 GEGTDLLYYE GLHGGVVTKD NDVAKHVDLL IGMVPIVNLE WIQKIIRDTN KRGHSREAVT 180
  181 ASIVRSMEDY ISFITPQFSR THINFQRVPT VDTSNPFSAK AIPSLDESFV VIRFREVKNV 240
  241 DFQYYLRMID GSFMSRINTL VVPGGKMGLA MELILTPLIR DLMDRKNQAN KQLDWMSDL

Type	Start	End	Confidence
Signal Peptide	1	23	0.90
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	299	0.99