YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71146493, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.75
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAVIRVFLM TLALFIICTV SIFYCLLRPF HRDNVYHTSV FLGKITKIFG VDVELRIPAS  60
   61 LKDIGPVVWM ANHQNSYDLF THANAVQPGT VSVGKKSLKW IPIFGQMYWL TGNILIDRKN 120
  121 TSKAMNTIEL TADKIKKNKL SVWMFPEGTR SRGRGLLPLK TGAFRTALQA GVPIVPICAS 180
  181 NQVGTIDLNR WDNGKIIIEF LDPIHLDDAS RENLRSRVNE VHNLMSNKIE QLSIEAAAYH 240
  241 NK

Type	Start	End	Confidence
Cytoplasmic	1	6	0.49
Transmembrane Helix	7	27	0.71
Non-Cytoplasmic	28	242	0.74